Files
atc-agents/api/lineage.py
T
mo f36c8906bc feat(governance): close the 6 data-disease gaps — DQ monitoring, ownership, access posture, lineage & observability
Adds native Command Center features (no new containers) integrated as sub-tabs
in the existing Data Explorer and Data Quality views:

- Continuous Data Quality (dq_monitor.py): live completeness/uniqueness/validity/
  freshness scorecards via Trino with rolling trends → DataQuality "Live Monitoring".
- Ownership & stewardship (catalog_governance.py): owner/steward/tier matrix,
  orphan detection, business glossary; local store best-effort synced to
  OpenMetadata (owner PATCH) → Data Explorer "Ownership".
- Access & policy posture: per-dataset compliance combining PII masking, ownership,
  live DQ and observability alerts vs data contracts → Data Explorer "Access & Policies".
- Lineage (lineage.py): staged source→CDC→Spark→S3→Iceberg→Trino→serving graph with
  live row counts and column-level PII/masking tracing → Data Explorer "Lineage".
- Observability (observability.py): volume/freshness/schema-drift monitoring with
  alerts → Data Explorer "Observability".
- Shared lake_meta.py dataset registry + bounded Trino client; fast native row-count
  and PK-indexed freshness so monitors stay cheap on 25-54M-row tables.
- LLM context (lab_context.py) enriched with DQ scores, ownership and active alerts.
2026-06-29 17:43:37 +00:00

249 lines
10 KiB
Python

"""Data lineage graph for the Command Center (Disease #6 — Traceability).
Models the real end-to-end pipeline as an explicit, staged node/edge graph:
source DB → Debezium/Kafka (CDC) → Spark / Kafka Connect → S3 Parquet lake
→ Iceberg lakehouse (curated_masked / hadoop) → Trino federation
→ serving (Elasticsearch, RAG/ChromaDB, vLLM, Command Center chat)
Table-backed nodes are enriched with live Trino row counts. For the sales path
we expose column-level lineage with PII / masking status (reusing pii_catalog),
so an operator can trace any field from source to the masked curated layer.
OpenMetadata table lineage is layered in best-effort where the FQN resolves.
Endpoints:
GET /api/lineage/graph?dataset=<key> -> nodes + edges (+ column links)
GET /api/lineage/datasets -> selectable datasets
"""
from __future__ import annotations
import os
import time
from typing import Any
import httpx
from fastapi import APIRouter
from fastapi.responses import JSONResponse
from lake_meta import DATASETS, DATASET_BY_KEY, trino_scalar
router = APIRouter(prefix="/api/lineage", tags=["lineage"])
OPENMETADATA_URL = os.getenv("OPENMETADATA_URL", "").rstrip("/")
OPENMETADATA_TOKEN = os.getenv("OPENMETADATA_TOKEN", "")
_cache: dict[str, Any] = {"ts": 0.0, "data": None}
_TTL = 30.0
# Which source datasets flow through the CDC → lakehouse pipeline.
_SOURCE_KEYS = ["orders", "hr", "supply", "telemetry"]
def _is_active() -> tuple[bool, bool]:
gen = arch = False
try:
from trino_federated import generator_active
gen = bool(generator_active())
except Exception:
pass
try:
from storage_s3 import archive_active
arch = bool(archive_active())
except Exception:
pass
return gen, arch
def _obs_counts() -> dict[str, int | None]:
"""Reuse the row counts the observability monitor already polls in-memory,
so the lineage graph never issues its own (potentially slow) count(*)."""
try:
from observability import _state, _lock
with _lock:
return {k: v.get("rows") for k, v in _state["datasets"].items()}
except Exception:
return {}
def _row_count(ds_key: str, counts: dict[str, int | None]) -> int | None:
return counts.get(ds_key)
def _pii_columns(ds_key: str) -> list[dict[str, Any]]:
"""Column-level detail with PII/masking flags from pii_catalog (best-effort).
ds_key is a lake_meta key; map it to the pii_catalog key first."""
pii_key = (DATASET_BY_KEY.get(ds_key, {}) or {}).get("pii_key", ds_key)
try:
from pii_catalog import get_pii
data = get_pii()
for d in data.get("datasets", []):
if d.get("key") == pii_key or d.get("node_id") == pii_key:
return [{"name": c["name"], "category": c.get("category"),
"masked": bool(c.get("masked")), "pii": True}
for c in d.get("pii_columns", [])]
except Exception:
pass
return []
def _om_lineage(fqn: str) -> dict[str, int]:
"""OpenMetadata table lineage (best-effort, short timeout). Kept out of the
hot path by default; only called when LINEAGE_OM_ENRICH=1 is set."""
if not OPENMETADATA_URL or not fqn or os.getenv("LINEAGE_OM_ENRICH", "0") != "1":
return {}
url = f"{OPENMETADATA_URL}/api/v1/lineage/table/name/{fqn}?upstreamDepth=1&downstreamDepth=1"
headers = {"Accept": "application/json"}
if OPENMETADATA_TOKEN:
headers["Authorization"] = f"Bearer {OPENMETADATA_TOKEN}"
try:
with httpx.Client(timeout=4.0, verify=False) as c:
r = c.get(url, headers=headers)
if r.status_code != 200:
return {}
j = r.json()
return {"upstream": len(j.get("upstreamEdges") or []),
"downstream": len(j.get("downstreamEdges") or [])}
except Exception:
return {}
def _build() -> dict[str, Any]:
gen_active, arch_active = _is_active()
counts = _obs_counts()
nodes: list[dict[str, Any]] = []
edges: list[dict[str, Any]] = []
seen: set[str] = set()
def node(nid: str, label: str, ntype: str, stage: int, **meta: Any) -> None:
if nid in seen:
return
seen.add(nid)
nodes.append({"id": nid, "label": label, "type": ntype, "stage": stage, "meta": meta})
def edge(src: str, dst: str, label: str, kind: str, active: bool = False) -> None:
edges.append({"id": f"{src}->{dst}", "source": src, "target": dst,
"label": label, "kind": kind, "active": active})
# Stage 5/6 shared serving nodes
node("trino", "Trino", "engine", 5, engine="Trino", note="Federated SQL across every catalog")
node("es", "Elasticsearch", "serving", 6, engine="Elasticsearch", note="Business + infra search indices")
node("rag", "ChromaDB (RAG)", "serving", 6, engine="ChromaDB", note="Vector store / embeddings")
node("vllm", "vLLM", "serving", 6, engine="vLLM", note="LLM inference (GPU)")
node("cc", "Command Center", "serving", 6, engine="React", note="Knowledge Chat & dashboards")
edge("rag", "vllm", "context", "serve", active=True)
edge("vllm", "cc", "answers", "serve", active=True)
edge("trino", "es", "index business data", "serve")
edge("es", "cc", "search", "serve")
edge("trino", "cc", "dashboards", "serve")
for key in _SOURCE_KEYS:
ds = DATASET_BY_KEY[key]
src_id = f"src_{key}"
topic_id = f"topic_{key}"
lake_id = f"lake_{key}"
rows = _row_count(key, counts)
cols = _pii_columns(key)
node(src_id, f"{ds['engine']}\n{ds['table']}", "source", 0,
engine=ds["engine"], table=ds["fqtn"], rows=rows, domain=ds.get("domain"),
columns=cols, ts_col=ds.get("ts_col"), key_col=ds.get("key_col"),
om=_om_lineage(ds.get("om_fqn", "")))
# CDC path (Debezium → Kafka topic)
if ds.get("topic"):
node(topic_id, f"Kafka\n{ds['topic']}", "stream", 1,
engine="Kafka", topic=ds["topic"], note="Debezium CDC topic")
edge(src_id, topic_id, "Debezium CDC", "cdc", active=gen_active)
node("connect", "Kafka Connect", "stream", 2, engine="Kafka Connect",
note="Debezium source + HDFS/S3 sinks")
edge(topic_id, "connect", "consume", "cdc", active=gen_active)
# ETL offload (direct source → S3 Parquet lake)
node(lake_id, f"S3 lake\nlake/{key}", "storage", 3, engine="ObjectScale S3",
path=f"s3://data/lake/{key}/", note="Parquet parts (ETL offload)")
edge(src_id, lake_id, "ETL offload (Parquet)", "batch", active=arch_active)
# Spark / Connect → curated + hadoop Iceberg tables
node("spark", "Spark", "compute", 2, engine="Spark", note="Transform & mask → curated")
edge("connect", "spark", "stream", "transform", active=gen_active)
cur = DATASET_BY_KEY["curated"]
had = DATASET_BY_KEY["hadoop"]
node("iceberg_curated", f"Iceberg\n{cur['table']}", "lakehouse", 4, engine="Iceberg",
table=cur["fqtn"], rows=_row_count("curated", counts), masked_layer=True,
note="PII-masked curated layer", columns=_pii_columns("curated"),
om=_om_lineage(cur.get("om_fqn", "")))
node("iceberg_hadoop", f"Iceberg/HDFS\n{had['table']}", "lakehouse", 4, engine="Iceberg / HDFS",
table=had["fqtn"], rows=_row_count("hadoop", counts), note="Historical sales on HDFS",
om=_om_lineage(had.get("om_fqn", "")))
edge("spark", "iceberg_curated", "mask + write", "transform", active=arch_active)
edge("lake_orders", "iceberg_hadoop", "register external", "batch", active=arch_active)
edge("src_orders", "iceberg_curated", "curate (masked)", "transform")
# Lakehouse → Trino
for nid in ("iceberg_curated", "iceberg_hadoop"):
edge(nid, "trino", "query", "serve")
for key in _SOURCE_KEYS:
edge(f"src_{key}", "trino", "federate", "serve")
# Lake → RAG (documents/parquet feeding embeddings is conceptual)
edge("iceberg_curated", "rag", "embed (masked-safe)", "serve")
# Column-level links: source sales_orders → curated masked
column_links: list[dict[str, Any]] = []
src_cols = {c["name"] for c in _pii_columns("orders")}
cur_cols = {c["name"] for c in _pii_columns("curated")}
for cn in sorted(src_cols & cur_cols):
masked = any(c["name"] == cn and c["masked"] for c in _pii_columns("curated"))
column_links.append({"source": "src_orders", "target": "iceberg_curated",
"column": cn, "masked": masked})
return {
"ok": True,
"generated_at": time.strftime("%Y-%m-%dT%H:%M:%SZ", time.gmtime()),
"active": {"generator": gen_active, "archive": arch_active},
"stages": ["Sources", "CDC / Stream", "Compute", "Lake storage",
"Lakehouse", "Federation", "Serving"],
"nodes": nodes,
"edges": edges,
"column_links": column_links,
"om_connected": bool(OPENMETADATA_URL),
}
def get_graph(use_cache: bool = True) -> dict[str, Any]:
now = time.time()
if use_cache and _cache["data"] and now - _cache["ts"] < _TTL:
return _cache["data"]
data = _build()
_cache["data"] = data
_cache["ts"] = now
return data
@router.get("/datasets")
async def datasets() -> JSONResponse:
return JSONResponse({"ok": True, "datasets": [
{"key": d["key"], "label": d["label"], "engine": d["engine"],
"color": d["color"], "table": d["fqtn"]}
for d in DATASETS]})
@router.get("/graph")
async def graph(dataset: str | None = None, refresh: bool = False) -> JSONResponse:
from starlette.concurrency import run_in_threadpool
data = await run_in_threadpool(get_graph, not refresh)
if dataset and dataset in DATASET_BY_KEY:
# Filter to nodes reachable from / to the selected source, keep serving spine.
keep = {f"src_{dataset}", f"topic_{dataset}", f"lake_{dataset}",
"connect", "spark", "iceberg_curated", "iceberg_hadoop",
"trino", "es", "rag", "vllm", "cc"}
nodes = [n for n in data["nodes"] if n["id"] in keep]
node_ids = {n["id"] for n in nodes}
edges = [e for e in data["edges"] if e["source"] in node_ids and e["target"] in node_ids]
out = {**data, "nodes": nodes, "edges": edges, "focus": dataset}
return JSONResponse(out)
return JSONResponse(data)